Access data by filling out the form below

• If you don't want to download data you can return to our homepage or view it in the VisAnt browser. 
• If you want different datasets or the raw feature data used to generate our classifiers please contact us.
• View a list of the leave-one-out accuracy estimates of each TF classifier- click here.
• Download the top ranked features for each classifier in Excel or text format... please also the the associated README file.
• Download the whole dataset here.

We use the standard ORF name for genes and TFs.  If your gene names are in a different format you can translate the names at SGD. Full translation tables are available for download at SGD.  Also, the Ensembl Genome Browser allows you to download lists of gene translations.

Query TFSVM

When you enter your desired probability cutoff note that Probabilites are of the form P(target | SVM output) and a threshold of 0.5 represents the Bayes optimal decision threshold. Thus, a good classifier would normally choose any genes with P>0.5 as targets. For more confident sets, increase the threshold. When deciding which threshold to set, it may be useful to look at the accuracy of the classifier for your TF of interest. You can probably choose looser thresholds for more accurate classifiers.